STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLD6Phospholipase D family member 6. (250 aa)    
Predicted Functional Partners:
PISD
Phosphatidylserine decarboxylase.
   
 0.837
TDRKH
Tudor and KH domain containing.
    
 
 0.814
PNLDC1
PARN like, ribonuclease domain containing 1.
      
 0.800
PSPH
Phosphoserine phosphatase.
    
 0.782
RHBDD3
Rhomboid domain containing 3.
   
  
 0.776
FAM118A
Family with sequence similarity 118 member A.
     
 0.770
PLD5
Phospholipase D family member 5.
     
 0.768
GPAT2
Glycerol-3-phosphate acyltransferase 2, mitochondrial.
  
 
 0.758
EPHX2
Epoxide hydrolase 2.
  
 
 0.755
LETM2
Leucine zipper and EF-hand containing transmembrane protein 2.
      
 0.716
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.