STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPTLC3Serine palmitoyltransferase long chain base subunit 3. (552 aa)    
Predicted Functional Partners:
SPTLC1
Serine palmitoyltransferase long chain base subunit 1.
  
0.994
KDSR
3-ketodihydrosphingosine reductase.
     
 0.959
SDS
Serine dehydratase.
   
 0.897
SPTSSB
Serine palmitoyltransferase small subunit B.
    
 0.896
SHMT2
Serine hydroxymethyltransferase 2.
  
 
 0.893
SHMT1
Serine hydroxymethyltransferase 1.
  
 
 0.893
SRR
Serine racemase.
   
 0.892
SDSL
Serine dehydratase like.
   
 0.892
AGXT
Alanine--glyoxylate and serine--pyruvate aminotransferase.
    
 0.892
ENSPVAP00000010600
annotation not available
    
 0.892
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.