STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL1LSEL1L adaptor subunit of ERAD E3 ubiquitin ligase. (790 aa)    
Predicted Functional Partners:
DERL2
Derlin 2.
   
 0.995
OS9
OS9 endoplasmic reticulum lectin.
   
 0.987
SYVN1
Synoviolin 1.
   
 0.986
RNF5
Ring finger protein 5.
     
 0.985
DERL1
Derlin 1.
   
 0.982
DERL3
Derlin 3.
   
 0.962
AMFR
Autocrine motility factor receptor.
   
 0.949
ERLEC1
Endoplasmic reticulum lectin 1.
   
 0.941
VCP
Valosin containing protein.
   
 0.914
EDEM1
ER degradation enhancing alpha-mannosidase like protein 1.
   
 
 0.901
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.