STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FADS6Fatty acid desaturase 6. (353 aa)    
Predicted Functional Partners:
ENSPVAP00000016733
annotation not available
  
 0.951
ENSPVAP00000003487
annotation not available
   
 0.947
FDX1
Ferredoxin 1.
   
 0.947
ALDH18A1
Aldehyde dehydrogenase 18 family member A1.
    
 0.924
DPYD
Dihydropyrimidine dehydrogenase.
  
 0.909
DHODH
Dihydroorotate dehydrogenase (quinone).
  
 0.909
CYB5R4
Cytochrome b5 reductase 4.
  
 0.879
GLUL
Glutamate-ammonia ligase.
  
 
 0.856
LGSN
Lengsin, lens protein with glutamine synthetase domain.
  
 
 0.856
TMEM109
Transmembrane protein 109.
    
  0.839
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.