STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OTOP3Otopetrin 3. (591 aa)    
Predicted Functional Partners:
RGR
Retinal G protein coupled receptor.
      
 0.776
NR2C1
Nuclear receptor subfamily 2 group C member 1.
      
 0.771
TCTA
T cell leukemia translocation altered.
      
 0.745
OLFM1
Olfactomedin 1.
      
 0.695
RARRES2
Retinoic acid receptor responder 2.
      
 0.600
PDE8A
Phosphodiesterase 8A.
      
 0.577
ENSPVAP00000009083
annotation not available
      
 0.577
NUPR1
Nuclear protein 1, transcriptional regulator.
      
 0.566
FDXR
Ferredoxin reductase.
      
 0.559
RNF157
Ring finger protein 157.
      
 0.552
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.