STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBN1Ubinuclein 1. (1131 aa)    
Predicted Functional Partners:
CABIN1
Calcineurin binding protein 1.
   
 0.998
HIRA
Histone cell cycle regulator.
    
 0.997
ASF1A
Anti-silencing function 1A histone chaperone.
    
 0.996
ASF1B
Anti-silencing function 1B histone chaperone.
    
 0.896
H3-3A
H3.3 histone A.
    
 
 0.621
ENSPVAP00000007987
annotation not available
    
 
 0.621
ENSPVAP00000014047
annotation not available
    
 
 0.621
ZMYM3
Zinc finger MYM-type containing 3.
   
  
 0.615
TLK2
Tousled like kinase 2.
   
 
 0.601
ATRX
ATRX chromatin remodeler.
     
 0.586
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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