STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SH3RF1SH3 domain containing ring finger 1. (879 aa)    
Predicted Functional Partners:
KHDRBS2
KH RNA binding domain containing, signal transduction associated 2.
    
 
 0.784
OSBPL9
Oxysterol binding protein like 9.
      
 0.770
CSKMT
Citrate synthase lysine methyltransferase.
      
 0.769
IFRD2
Interferon related developmental regulator 2.
      
 0.769
GFM2
G elongation factor mitochondrial 2.
      
 0.737
RHOV
Ras homolog family member V.
    
  0.688
ENSPVAP00000004436
annotation not available
    
  0.666
SYNRG
Synergin gamma.
    
 
 0.662
MAP3K11
Mitogen-activated protein kinase kinase kinase 11.
    
 0.648
CCDC158
Coiled-coil domain containing 158.
    
 
 0.644
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.