STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBE2L6Ubiquitin conjugating enzyme E2 L6. (153 aa)    
Predicted Functional Partners:
TMEM189-UBE2V1
TMEM189-UBE2V1 readthrough.
   
 0.992
UBA7
Ubiquitin like modifier activating enzyme 7.
  
 0.985
PRKN
Parkin RBR E3 ubiquitin protein ligase.
    
 0.983
ENSPVAP00000015543
annotation not available
    
 0.982
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
 0.981
TRIM25
Tripartite motif containing 25.
    
 0.978
ARIH1
Ariadne RBR E3 ubiquitin protein ligase 1.
    
 0.973
UBB
Ubiquitin B.
   
 0.972
ENSPVAP00000005176
annotation not available
    
 0.922
HERC5
HECT and RLD domain containing E3 ubiquitin protein ligase 5.
   
 0.903
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.