STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARHGEF15Rho guanine nucleotide exchange factor 15. (842 aa)    
Predicted Functional Partners:
ECT2L
Epithelial cell transforming 2 like.
     
 0.860
FGD5
FYVE, RhoGEF and PH domain containing 5.
   
  
 0.748
ENSPVAP00000004436
annotation not available
    
 0.616
ENSPVAP00000002354
annotation not available
    
 0.596
RHOA
Ras homolog family member A.
    
 0.596
RHOB
Ras homolog family member B.
    
 0.596
SH2D5
SH2 domain containing 5.
      
 0.565
RND3
Rho family GTPase 3.
    
  0.564
RND1
Rho family GTPase 1.
    
  0.564
LRRC58
Leucine rich repeat containing 58.
      
 0.561
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.