STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ODF4Outer dense fiber of sperm tails 4. (249 aa)    
Predicted Functional Partners:
ODF3
Outer dense fiber of sperm tails 3.
      
 0.763
ENSPVAP00000008725
annotation not available
      
 0.755
DKKL1
Dickkopf like acrosomal protein 1.
      
 0.696
CABYR
Calcium binding tyrosine phosphorylation regulated.
      
 0.683
ENSPVAP00000004952
annotation not available
      
 0.667
SPEM1
Spermatid maturation 1.
      
 0.648
SLC26A8
Solute carrier family 26 member 8.
      
 0.630
LRRC6
Leucine rich repeat containing 6.
      
 0.627
ENSPVAP00000008928
annotation not available
      
 0.605
ENSPVAP00000010426
annotation not available
      
 0.605
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.