STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNFSF13BTNF superfamily member 13b. (251 aa)    
Predicted Functional Partners:
TNFRSF13C
TNF receptor superfamily member 13C.
    
 0.996
TNFRSF17
TNF receptor superfamily member 17.
    
 0.995
ENSPVAP00000006400
annotation not available
    
 0.973
ENSPVAP00000015373
TNFSF12-TNFSF13 readthrough.
   
 
0.920
ENSPVAP00000015994
annotation not available
    
 
 0.845
CD40LG
CD40 ligand.
   
 
 0.795
LTB
Lymphotoxin beta.
   
 
 0.791
ENSPVAP00000013684
annotation not available
     
 0.776
TNFSF11
TNF superfamily member 11.
   
 0.756
TRAF3
TNF receptor associated factor 3.
   
 0.743
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.