STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAP1Small ArfGAP 1. (466 aa)    
Predicted Functional Partners:
ARFGAP1
ADP ribosylation factor GTPase activating protein 1.
    
0.812
SMAP2
Small ArfGAP2.
  
 
 
0.774
CLSTN1
Calsyntenin 1.
      
 0.769
DENND5B
DENN domain containing 5B.
      
 0.699
RBP2
Retinol binding protein 2.
      
 0.697
TBCD
Tubulin folding cofactor D.
      
 0.696
ASAP3
ArfGAP with SH3 domain, ankyrin repeat and PH domain 3.
    
0.622
KIF13B
Kinesin family member 13B.
    
 
 0.617
KIF13A
Kinesin family member 13A.
    
 
 0.617
APPL1
Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1.
    
 0.609
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.