STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LMNALamin A/C. (651 aa)    
Predicted Functional Partners:
EMD
Emerin.
    
 0.993
LMNB1
Lamin B1.
    
0.983
ENSPVAP00000016008
annotation not available
   
 0.974
LMNB2
Lamin B2.
    
0.973
CASP6
Caspase 6.
    
 0.964
SUN1
Sad1 and UNC84 domain containing 1.
    
 0.936
SUN2
Sad1 and UNC84 domain containing 2.
    
 0.936
TMPO
Thymopoietin.
   
 0.883
ENSPVAP00000000393
annotation not available
   
 0.871
SYNE1
Spectrin repeat containing nuclear envelope protein 1.
    
 0.866
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.