STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBX4T-box transcription factor 4. (506 aa)    
Predicted Functional Partners:
NKX2-5
NK2 homeobox 5.
   
 
 0.832
ATP7A
ATPase copper transporting alpha.
   
  
 0.775
BDNF
Brain derived neurotrophic factor.
      
 0.771
ENSPVAP00000002987
annotation not available
    
 
 0.726
YAP1
Yes associated protein 1.
    
 0.668
WWTR1
WW domain containing transcription regulator 1.
    
 0.668
HOXD11
Homeobox D11.
    
 
 0.653
PITX1
Paired like homeodomain 1.
    
 
 0.615
PDLIM7
PDZ and LIM domain 7.
    
 
 0.606
SLC35B4
Solute carrier family 35 member B4.
      
 0.593
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.