STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNX22Sorting nexin 22. (193 aa)    
Predicted Functional Partners:
FNBP1
Formin binding protein 1.
    
 
 0.789
NUDT17
Nudix hydrolase 17.
      
 0.769
ZNF24
Zinc finger protein 24.
      
 0.769
ENSPVAP00000016823
annotation not available
      
 0.769
LMNTD2
Lamin tail domain containing 2.
      
 0.637
SNX24
Sorting nexin 24.
  
 
  
0.615
AKAP7
A-kinase anchoring protein 7.
      
 0.604
BCCIP
BRCA2 and CDKN1A interacting protein.
      
 0.604
SNX11
Sorting nexin 11.
     
 0.604
CLEC6A
C-type lectin domain containing 6A.
      
 0.583
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.