STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XRCC1X-ray repair cross complementing 1. (630 aa)    
Predicted Functional Partners:
LIG3
DNA ligase 3.
   
 0.999
POLB
DNA polymerase beta.
   
 0.993
PNKP
Polynucleotide kinase 3'-phosphatase.
   
 0.976
LIG4
DNA ligase 4.
   
 0.959
POLL
DNA polymerase lambda.
   
 0.948
PARP1
poly(ADP-ribose) polymerase 1.
    
 
 0.943
LIG1
DNA ligase 1.
   
 0.935
APLF
Aprataxin and PNKP like factor.
    
 
 0.925
NEIL1
Nei like DNA glycosylase 1.
    
 0.919
PARP2
poly(ADP-ribose) polymerase 2.
    
 
 0.916
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.