STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLHL28Kelch like family member 28. (585 aa)    
Predicted Functional Partners:
RNF166
Ring finger protein 166.
    
 
 0.830
ENSPVAP00000016796
annotation not available
    
 
 0.813
ENSPVAP00000016961
annotation not available
    
 0.792
BBS9
Bardet-Biedl syndrome 9.
    
 0.787
FBXO28
F-box protein 28.
   
  
 0.784
BBS4
Bardet-Biedl syndrome 4.
    
 0.772
TTC8
Tetratricopeptide repeat domain 8.
    
 0.771
PRKN
Parkin RBR E3 ubiquitin protein ligase.
      
 0.769
BBS7
Bardet-Biedl syndrome 7.
    
 0.736
SQSTM1
Sequestosome 1.
    
 0.718
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.