STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BRIX1Biogenesis of ribosomes BRX1. (300 aa)    
Predicted Functional Partners:
EBNA1BP2
EBNA1 binding protein 2.
   
 
 0.999
NIFK
Nucleolar protein interacting with the FHA domain of MKI67.
   
 
 0.999
NIP7
Nucleolar pre-rRNA processing protein NIP7.
   
 
 0.998
RPF1
Ribosome production factor 1 homolog.
   
 
 0.997
GTPBP4
GTP binding protein 4.
   
 
 0.997
ENSPVAP00000010204
annotation not available
   
 
 0.996
RSL1D1
Ribosomal L1 domain containing 1.
   
 
 0.995
WDR12
WD repeat domain 12.
   
 
 0.995
NOC3L
NOC3 like DNA replication regulator.
   
 
 0.995
RPF2
Ribosome production factor 2 homolog.
   
 
 0.994
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.