STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMIGD2Transmembrane and immunoglobulin domain containing 2. (277 aa)    
Predicted Functional Partners:
SNRPD2
Small nuclear ribonucleoprotein D2 polypeptide.
   
 0.934
ENSPVAP00000001964
annotation not available
   
 0.933
SNRPD3
Small nuclear ribonucleoprotein D3 polypeptide.
   
 0.930
SNRPF
Small nuclear ribonucleoprotein polypeptide F.
   
 0.929
SNRPG
Small nuclear ribonucleoprotein polypeptide G.
   
 0.920
EFTUD2
Elongation factor Tu GTP binding domain containing 2.
   
 0.910
PRPF8
pre-mRNA processing factor 8.
   
 0.899
SF3B4
Splicing factor 3b subunit 4.
    
 0.899
SNRNP200
Small nuclear ribonucleoprotein U5 subunit 200.
   
 0.898
SF3B3
Splicing factor 3b subunit 3.
    
 0.897
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.