STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB1BRAB1B, member RAS oncogene family. (201 aa)    
Predicted Functional Partners:
GDI2
GDP dissociation inhibitor 2.
   
 0.996
TRAPPC8
Trafficking protein particle complex 8.
    
 0.975
TRAPPC1
Trafficking protein particle complex 1.
    
 0.975
TRAPPC4
Trafficking protein particle complex 4.
    
 0.972
TRAPPC2B
Trafficking protein particle complex 2B.
    
 0.969
TRAPPC3
Trafficking protein particle complex 3.
   
 0.962
TRAPPC3L
Trafficking protein particle complex 3 like.
   
 0.962
USO1
USO1 vesicle transport factor.
   
 0.953
TBC1D20
TBC1 domain family member 20.
    
 0.950
TRAPPC6B
Trafficking protein particle complex 6B.
    
 0.933
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.