STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SURF6Surfeit 6. (358 aa)    
Predicted Functional Partners:
ENSPVAP00000003471
annotation not available
   
 
 0.992
MAK16
MAK16 homolog.
   
   0.987
GTPBP4
GTP binding protein 4.
   
 
 0.987
EBNA1BP2
EBNA1 binding protein 2.
   
 
 0.987
RPF1
Ribosome production factor 1 homolog.
   
 
 0.979
NIFK
Nucleolar protein interacting with the FHA domain of MKI67.
   
 
 0.978
ENSPVAP00000016725
annotation not available
   
 
 0.976
RSL1D1
Ribosomal L1 domain containing 1.
   
 
 0.975
BRIX1
Biogenesis of ribosomes BRX1.
   
 
 0.968
RRP15
Ribosomal RNA processing 15 homolog.
   
 
 0.961
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.