STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SURF1SURF1 cytochrome c oxidase assembly factor. (296 aa)    
Predicted Functional Partners:
COX15
Cytochrome c oxidase assembly homolog COX15.
  
 
 0.958
COX11
Cytochrome c oxidase copper chaperone COX11.
  
 
 0.910
COX10
Cytochrome c oxidase assembly factor heme A:farnesyltransferase COX10.
  
 
 0.870
SCO2
SCO cytochrome c oxidase assembly protein 2.
  
  
 0.797
DHTKD1
Dehydrogenase E1 and transketolase domain containing 1.
    
 
 0.793
CYC1
Cytochrome c1.
   
 0.777
UGDH
UDP-glucose 6-dehydrogenase.
      0.765
THYN1
Thymocyte nuclear protein 1.
    
  0.752
SEC61A1
SEC61 translocon alpha 1 subunit.
   
   0.729
SEC61A2
SEC61 translocon alpha 2 subunit.
   
   0.729
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.