STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDE1CPhosphodiesterase 1C. (761 aa)    
Predicted Functional Partners:
ENSPVAP00000016875
annotation not available
    
 0.950
CALML4
Calmodulin like 4.
    
 0.946
GUCY1B1
Guanylate cyclase 1 soluble subunit beta 1.
     
 0.941
CALML6
Calmodulin like 6.
    
 0.937
GNB3
G protein subunit beta 3.
     
 0.934
ADCY7
Adenylate cyclase 7.
     
 0.929
PTRHD1
peptidyl-tRNA hydrolase domain containing 1.
     
 0.926
ADCY3
Adenylate cyclase 3.
     
 0.926
PDE1A
Phosphodiesterase 1A.
  
 
 
0.922
PDE1B
Phosphodiesterase 1B.
  
 
 
0.920
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.