STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM166BFamily with sequence similarity 166 member B. (279 aa)    
Predicted Functional Partners:
WDR90
WD repeat domain 90.
    
   0.705
EFCAB1
EF-hand calcium binding domain 1.
    
   0.611
ENSPVAP00000002564
annotation not available
    
   0.611
SPAG8
Sperm associated antigen 8.
    
   0.611
C9orf116
Chromosome 9 open reading frame 116.
    
   0.611
TTC25
Tetratricopeptide repeat domain 25.
    
   0.611
C19orf71
Chromosome 19 open reading frame 71.
    
   0.611
CFAP20
Cilia and flagella associated protein 20.
    
   0.611
TEKT2
Tektin 2.
    
   0.611
C9orf135
Chromosome 9 open reading frame 135.
    
   0.611
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.