STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEMA3FSemaphorin 3F. (779 aa)    
Predicted Functional Partners:
NRP1
Neuropilin 1.
    
 0.980
NRP2
Neuropilin 2.
    
 
 0.958
PLXNA3
Plexin A3.
    
 0.939
PLXNA1
Plexin A1.
    
 0.831
PLXND1
Plexin D1.
    
 0.800
PLXNA4
Plexin A4.
    
 0.799
SLIT1
Slit guidance ligand 1.
      
 0.796
EFNA5
Ephrin A5.
      
 0.769
PLXNA2
Plexin A2.
    
 0.767
PLXNC1
Plexin C1.
    
 0.759
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.