STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSMEM2Leucine rich single-pass membrane protein 2. (161 aa)    
Predicted Functional Partners:
WDR47
WD repeat domain 47.
      
 0.600
LRRK1
Leucine rich repeat kinase 1.
      
 0.595
ARHGAP21
Rho GTPase activating protein 21.
      
 0.564
UBAP2
Ubiquitin associated protein 2.
      
 0.512
AP3D1
Adaptor related protein complex 3 subunit delta 1.
      
 0.509
SCUBE1
Signal peptide, CUB domain and EGF like domain containing 1.
      
 0.506
PDE1C
Phosphodiesterase 1C.
      
 0.431
LIMK2
LIM domain kinase 2.
      
 0.430
PPA2
Inorganic pyrophosphatase 2.
      
 0.424
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.