STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHACTR4Phosphatase and actin regulator 4. (717 aa)    
Predicted Functional Partners:
VAX2
Ventral anterior homeobox 2.
      
 0.800
VAX1
Ventral anterior homeobox 1.
      
 0.776
CACNA1I
Calcium voltage-gated channel subunit alpha1 I.
      
 0.769
CHD7
Chromodomain helicase DNA binding protein 7.
      
 0.699
PPP1CC
Protein phosphatase 1 catalytic subunit gamma.
    
 
 0.610
PPP1CA
Protein phosphatase 1 catalytic subunit alpha.
    
 
 0.610
PITX2
Paired like homeodomain 2.
      
 0.579
CACNA1G
Calcium voltage-gated channel subunit alpha1 G.
      
 0.578
ARID4A
AT-rich interaction domain 4A.
      
 0.574
RDH10
Retinol dehydrogenase 10.
      
 0.573
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.