STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZFP1ZFP1 zinc finger protein. (404 aa)    
Predicted Functional Partners:
MEGF6
Multiple EGF like domains 6.
    
 0.719
MAPK1
Mitogen-activated protein kinase 1.
    
 0.698
ENSPVAP00000006200
annotation not available
    
  0.676
TRIM28
Tripartite motif containing 28.
    
  0.637
TRIM33
Tripartite motif containing 33.
    
  0.562
TXLNG
Taxilin gamma.
      
 0.558
PUS1
Pseudouridine synthase 1.
      
 0.557
KDM6A
Lysine demethylase 6A.
    
 0.549
SCX
Scleraxis bHLH transcription factor.
    
 
 0.542
TCF15
Transcription factor 15.
    
 
 0.542
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.