STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOXD3Homeobox D3. (431 aa)    
Predicted Functional Partners:
HOXA6
Homeobox A6.
   
  
0.764
COA7
Cytochrome c oxidase assembly factor 7 (putative).
    
 
 0.574
ENSPVAP00000015641
annotation not available
      
 0.562
ENSPVAP00000000703
annotation not available
    
 0.557
PBX2
PBX homeobox 2.
    
 0.557
ENSPVAP00000015105
annotation not available
    
 0.557
PBX4
PBX homeobox 4.
    
 0.557
ZIC4
Zic family member 4.
    
 
 0.535
HOXD10
Homeobox D10.
   
 
0.524
SBNO2
Strawberry notch homolog 2.
      
 0.519
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.