STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHST13Carbohydrate sulfotransferase 13. (341 aa)    
Predicted Functional Partners:
CHST12
Carbohydrate sulfotransferase 12.
     
0.876
CHST11
Carbohydrate sulfotransferase 11.
  
  
 
0.875
DEFB124
Defensin beta 124.
      
 0.770
HMGCLL1
3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1.
      
 0.770
PROZ
Protein Z, vitamin K dependent plasma glycoprotein.
      
 0.728
CSGALNACT2
Chondroitin sulfate N-acetylgalactosaminyltransferase 2.
     
 0.720
GALNT13
Polypeptide N-acetylgalactosaminyltransferase 13.
      
 0.661
HAPLN1
Hyaluronan and proteoglycan link protein 1.
     
 0.659
FCN3
Ficolin 3.
      
 0.605
HAPLN2
Hyaluronan and proteoglycan link protein 2.
   
  
 0.598
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.