STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPVAP00000016517annotation not available (428 aa)    
Predicted Functional Partners:
POLRMT
RNA polymerase mitochondrial.
   
 0.968
BYSL
Bystin like.
   
 
 0.943
ENSPVAP00000002187
annotation not available
   
 
 0.893
TSR1
TSR1 ribosome maturation factor.
   
 
 0.876
IMP4
IMP U3 small nucleolar ribonucleoprotein 4.
   
   0.874
FAU
FAU ubiquitin like and ribosomal protein S30 fusion.
    
   0.860
WDR3
WD repeat domain 3.
   
   0.860
WDR36
WD repeat domain 36.
   
   0.859
UTP3
UTP3 small subunit processome component.
   
   0.853
NOB1
NIN1 (RPN12) binding protein 1 homolog.
   
 
 0.850
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.