STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTRHD1peptidyl-tRNA hydrolase domain containing 1. (140 aa)    
Predicted Functional Partners:
GNAL
G protein subunit alpha L.
    
 0.963
PDE6A
Phosphodiesterase 6A.
    
 0.952
PDE3A
Phosphodiesterase 3A.
    
 0.948
NME3
NME/NM23 nucleoside diphosphate kinase 3.
  
 
 0.940
GNAS
GNAS complex locus.
    
 0.937
PDE5A
Phosphodiesterase 5A.
    
 0.933
PDE4B
Phosphodiesterase 4B.
    
 0.933
PDE1C
Phosphodiesterase 1C.
     
 0.926
PDE2A
Phosphodiesterase 2A.
    
 0.923
PDE6B
Phosphodiesterase 6B.
    
 0.909
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.