STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCAF15DDB1 and CUL4 associated factor 15. (601 aa)    
Predicted Functional Partners:
DDB1
Damage specific DNA binding protein 1.
    
 
 0.945
DDA1
DET1 and DDB1 associated 1.
    
 
 0.907
RBM23
RNA binding motif protein 23.
    
 
 0.742
RBM39
RNA binding motif protein 39.
    
 
 0.742
CUL4B
Cullin 4B.
    
 
 0.586
CUL4A
Cullin 4A.
    
 
 0.586
LEMD3
LEM domain containing 3.
    
 
 0.556
NDUFS5
NADH:ubiquinone oxidoreductase subunit S5.
   
   0.492
NDUFB7
NADH:ubiquinone oxidoreductase subunit B7.
  
   0.413
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.