STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOD1Nucleotide binding oligomerization domain containing 1. (951 aa)    
Predicted Functional Partners:
RIPK2
Receptor interacting serine/threonine kinase 2.
   
 0.989
ATG16L1
Autophagy related 16 like 1.
    
 0.979
ENSPVAP00000013791
annotation not available
    
 0.936
ENSPVAP00000015543
annotation not available
    
  0.911
NOD2
Nucleotide binding oligomerization domain containing 2.
   
0.904
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.892
UBB
Ubiquitin B.
    
 0.879
MEFV
MEFV innate immuity regulator, pyrin.
    
 0.819
PYCARD
PYD and CARD domain containing.
   
 0.812
TRAF6
TNF receptor associated factor 6.
   
 0.789
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.