STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBXN8UBX domain protein 8. (269 aa)    
Predicted Functional Partners:
UBXN1
UBX domain protein 1.
   
 0.986
UBXN2A
UBX domain protein 2A.
    
 0.986
UBXN6
UBX domain protein 6.
    
 0.982
UBXN7
UBX domain protein 7.
    
 
 0.978
VCP
Valosin containing protein.
    
 0.978
UBXN4
UBX domain protein 4.
   
 
 0.947
NSFL1C
NSFL1 cofactor.
    
 0.946
UBXN2B
UBX domain protein 2B.
    
 0.933
UBXN11
UBX domain protein 11.
    
 0.930
SVIP
Small VCP interacting protein.
     
 0.883
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.