STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAX7Paired box 7. (512 aa)    
Predicted Functional Partners:
PAX3
Paired box 3.
   
 
0.893
MYOD1
Myogenic differentiation 1.
   
 
 0.831
EYA1
EYA transcriptional coactivator and phosphatase 1.
    
 
 0.831
MYF5
Myogenic factor 5.
   
 
 0.825
MYOG
Myogenin.
   
 
 0.823
MAB21L1
Mab-21 like 1.
   
  
 0.819
TIMM10
Translocase of inner mitochondrial membrane 10.
   
 0.803
MYF6
Myogenic factor 6.
   
 
 0.792
ENSPVAP00000009068
annotation not available
    
 0.789
CACTIN
Cactin, spliceosome C complex subunit.
    
 0.759
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.