STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALKBH4alkB homolog 4, lysine demethylase. (296 aa)    
Predicted Functional Partners:
ALKBH8
alkB homolog 8, tRNA methyltransferase.
   
  
 0.770
ENSPVAP00000007977
annotation not available
      
 0.769
N6AMT1
N-6 adenine-specific DNA methyltransferase 1.
      
 0.769
ALKBH6
alkB homolog 6.
      
 0.769
D2HGDH
D-2-hydroxyglutarate dehydrogenase.
      
 0.745
ALKBH2
alkB homolog 2, alpha-ketoglutarate dependent dioxygenase.
      
 0.744
SYCP1
Synaptonemal complex protein 1.
      
 0.736
ALKBH7
alkB homolog 7.
   
  
 0.713
ENSPVAP00000008770
annotation not available
      
 0.699
KLHL31
Kelch like family member 31.
      
 0.688
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.