STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SERF2Small EDRK-rich factor 2. (133 aa)    
Predicted Functional Partners:
PIP5K1A
Phosphatidylinositol-4-phosphate 5-kinase type 1 alpha.
      
 0.635
HYPK
Huntingtin interacting protein K.
   
  
 0.620
TMEM54
Transmembrane protein 54.
      
 0.608
SNCA
Synuclein alpha.
    
 
 0.602
ENSPVAP00000014082
annotation not available
      
 0.596
ENSPVAP00000014551
annotation not available
      
 0.591
MFAP1
Microfibril associated protein 1.
   
  
 0.558
SERINC4
Serine incorporator 4.
      
 0.547
ENSPVAP00000005859
annotation not available
      
 0.546
TMEM134
Transmembrane protein 134.
      
 0.541
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.