Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A4X06_g111 | A4X06_g144 | A0A177VYL9 | A0A177VXN9 | Plus3 domain-containing protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.939 |
A4X06_g111 | A4X06_g2134 | A0A177VYL9 | A0A177VSY1 | Plus3 domain-containing protein. | Uncharacterized protein. | 0.997 |
A4X06_g111 | A4X06_g2850 | A0A177VYL9 | A0A177VPI5 | Plus3 domain-containing protein. | Uncharacterized protein. | 0.970 |
A4X06_g111 | A4X06_g4655 | A0A177VYL9 | A0A177VJI5 | Plus3 domain-containing protein. | Spt4 domain-containing protein. | 0.961 |
A4X06_g111 | A4X06_g4820 | A0A177VYL9 | A0A177VLG9 | Plus3 domain-containing protein. | Uncharacterized protein. | 0.997 |
A4X06_g111 | A4X06_g5891 | A0A177VYL9 | A0A177VA68 | Plus3 domain-containing protein. | RPOLD domain-containing protein. | 0.950 |
A4X06_g111 | A4X06_g6116 | A0A177VYL9 | A0A177V2N8 | Plus3 domain-containing protein. | Uncharacterized protein. | 0.997 |
A4X06_g111 | A4X06_g6241 | A0A177VYL9 | A0A177UY11 | Plus3 domain-containing protein. | FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...] | 0.992 |
A4X06_g111 | A4X06_g67 | A0A177VYL9 | A0A177VYP3 | Plus3 domain-containing protein. | Uncharacterized protein. | 0.997 |
A4X06_g111 | A4X06_g7387 | A0A177VYL9 | A0A177U5V9 | Plus3 domain-containing protein. | S1 motif domain-containing protein. | 0.960 |
A4X06_g144 | A4X06_g111 | A0A177VXN9 | A0A177VYL9 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Plus3 domain-containing protein. | 0.939 |
A4X06_g144 | A4X06_g2134 | A0A177VXN9 | A0A177VSY1 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Uncharacterized protein. | 0.959 |
A4X06_g144 | A4X06_g2850 | A0A177VXN9 | A0A177VPI5 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Uncharacterized protein. | 0.986 |
A4X06_g144 | A4X06_g4655 | A0A177VXN9 | A0A177VJI5 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Spt4 domain-containing protein. | 0.998 |
A4X06_g144 | A4X06_g4820 | A0A177VXN9 | A0A177VLG9 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Uncharacterized protein. | 0.956 |
A4X06_g144 | A4X06_g5891 | A0A177VXN9 | A0A177VA68 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | RPOLD domain-containing protein. | 0.999 |
A4X06_g144 | A4X06_g6116 | A0A177VXN9 | A0A177V2N8 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Uncharacterized protein. | 0.944 |
A4X06_g144 | A4X06_g6241 | A0A177VXN9 | A0A177UY11 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...] | 0.976 |
A4X06_g144 | A4X06_g67 | A0A177VXN9 | A0A177VYP3 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Uncharacterized protein. | 0.975 |
A4X06_g144 | A4X06_g7387 | A0A177VXN9 | A0A177U5V9 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | S1 motif domain-containing protein. | 0.965 |
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