STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A4X06_g6189Retrotrans_gag domain-containing protein. (328 aa)    
Predicted Functional Partners:
A4X06_g8797
Retrotrans_gag domain-containing protein.
  
     0.509
A4X06_g6311
Tryptophan synthase.
     
  0.476
A4X06_g2460
Uncharacterized protein.
    
 0.444
A4X06_g4529
WD_REPEATS_REGION domain-containing protein.
    
  0.430
A4X06_g4435
Stn1 domain-containing protein.
    
  0.413
Your Current Organism:
Tilletia controversa
NCBI taxonomy Id: 13291
Other names: T. controversa, Tilletia contraversa, dwarf bunt fungus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.