STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A4X06_g5718Reverse transcriptase domain-containing protein. (1494 aa)    
Predicted Functional Partners:
A4X06_g4114
Uncharacterized protein.
    
 0.735
rpn11
26S proteasome regulatory subunit rpn11.
    
  0.707
A4X06_g8184
Uncharacterized protein.
   
  0.678
A4X06_g618
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
    
  0.656
A4X06_g2512
Uncharacterized protein.
    
  0.624
A4X06_g61
Ubiquitin-like domain-containing protein.
    
  0.624
A4X06_g6110
Ubiquitin-like domain-containing protein.
    
  0.619
A4X06_g1683
Uncharacterized protein.
    
  0.619
A4X06_g5868
Lysophospholipase.
    
 0.616
A4X06_g4024
Lysophospholipase.
    
 0.616
Your Current Organism:
Tilletia controversa
NCBI taxonomy Id: 13291
Other names: T. controversa, Tilletia contraversa, dwarf bunt fungus
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