Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A4X06_g55845'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. (1184 aa)    
Predicted Functional Partners:
A4X06_g569
RAI1 domain-containing protein.
   
 0.997
A4X06_g6207
CLP1_P domain-containing protein.
   
 0.993
A4X06_g5388
Uncharacterized protein.
    
 0.988
A4X06_g881
Uncharacterized protein.
  
 
0.982
A4X06_g6465
HRDC domain-containing protein.
    
 0.970
A4X06_g4558
Uncharacterized protein; Belongs to the RNR ribonuclease family.
   
 0.965
A4X06_g5891
RPOLD domain-containing protein.
   
 
 0.957
A4X06_g4032
Uncharacterized protein.
    
 
 0.945
A4X06_g1962
Uncharacterized protein.
   
 0.934
A4X06_g144
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.933
Your Current Organism:
Tilletia controversa
NCBI taxonomy Id: 13291
Other names: T. controversa, Tilletia contraversa, dwarf bunt fungus
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