STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A4X06_g5046Reverse transcriptase Ty1/copia-type domain-containing protein. (360 aa)    
Predicted Functional Partners:
A4X06_g9723
Reverse transcriptase Ty1/copia-type domain-containing protein.
 
     0.885
A4X06_g9811
Reverse transcriptase Ty1/copia-type domain-containing protein.
 
     0.834
A4X06_g7612
Integrase catalytic domain-containing protein.
 
     0.577
A4X06_g9132
Reverse transcriptase Ty1/copia-type domain-containing protein.
 
     0.524
A4X06_g4529
WD_REPEATS_REGION domain-containing protein.
    
  0.524
A4X06_g8517
Uncharacterized protein.
  
     0.519
A4X06_g629
Integrase catalytic domain-containing protein.
  
     0.490
A4X06_g5392
Uncharacterized protein.
 
     0.479
A4X06_g9176
Integrase catalytic domain-containing protein.
 
     0.470
A4X06_g2460
Uncharacterized protein.
    
  0.464
Your Current Organism:
Tilletia controversa
NCBI taxonomy Id: 13291
Other names: T. controversa, Tilletia contraversa, dwarf bunt fungus
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