STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A4X06_g2738Uncharacterized protein. (1073 aa)    
Predicted Functional Partners:
A4X06_g3532
Uncharacterized protein.
    
 
 0.932
A4X06_g6438
Uncharacterized protein.
    
 
 0.910
A4X06_g960
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.906
A4X06_g1426
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.868
A4X06_g1188
Uncharacterized protein.
    
 
 0.823
A4X06_g9797
RNA_pol_Rpb1_5 domain-containing protein.
    
 
 0.802
A4X06_g9018
Uncharacterized protein.
    
 
 0.802
A4X06_g3902
RPOLA_N domain-containing protein.
    
 
 0.802
A4X06_g9699
Uncharacterized protein.
    
 
 0.779
A4X06_g6635
RPOLD domain-containing protein.
    
   0.772
Your Current Organism:
Tilletia controversa
NCBI taxonomy Id: 13291
Other names: T. controversa, Tilletia contraversa, dwarf bunt fungus
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