A4X06_g119 protein (Tilletia controversa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A4X06_g119

Peptidase_M24 domain-containing protein. (360 aa)

Predicted Functional Partners:

A4X06_g2088

0.822

A4X06_g9081

0.817

A4X06_g7499

0.813

A4X06_g7215

0.809

A4X06_g157

0.805

A4X06_g3486

0.790

A4X06_g2651

0.778

A4X06_g3887

0.758

A4X06_g8523

0.738

A4X06_g7027

0.726

Your Current Organism:

Tilletia controversa

NCBI taxonomy Id: 13291
Other names: T. controversa, Tilletia contraversa, dwarf bunt fungus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A4X06_g119	A4X06_g157	A0A177VZ50	A0A177VYI1	Peptidase_M24 domain-containing protein.	KOW domain-containing protein.	0.805
A4X06_g119	A4X06_g2088	A0A177VZ50	A0A177VRS8	Peptidase_M24 domain-containing protein.	Uncharacterized protein.	0.822
A4X06_g119	A4X06_g2651	A0A177VZ50	A0A177VQ09	Peptidase_M24 domain-containing protein.	Ribosomal_L23eN domain-containing protein.	0.778
A4X06_g119	A4X06_g3486	A0A177VZ50	A0A177VMM2	Peptidase_M24 domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS3 family.	0.790
A4X06_g119	A4X06_g3887	A0A177VZ50	A0A177VP72	Peptidase_M24 domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	0.758
A4X06_g119	A4X06_g7027	A0A177VZ50	A0A177U9T1	Peptidase_M24 domain-containing protein.	Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).	0.726
A4X06_g119	A4X06_g7215	A0A177VZ50	A0A177U751	Peptidase_M24 domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.	0.809
A4X06_g119	A4X06_g7499	A0A177VZ50	A0A177U4K8	Peptidase_M24 domain-containing protein.	Ribosomal_L18_c domain-containing protein.	0.813
A4X06_g119	A4X06_g8523	A0A177VZ50	A0A177TJF7	Peptidase_M24 domain-containing protein.	Uncharacterized protein.	0.738
A4X06_g119	A4X06_g9081	A0A177VZ50	A0A177T3Q3	Peptidase_M24 domain-containing protein.	Uncharacterized protein.	0.817
A4X06_g157	A4X06_g119	A0A177VYI1	A0A177VZ50	KOW domain-containing protein.	Peptidase_M24 domain-containing protein.	0.805
A4X06_g157	A4X06_g2088	A0A177VYI1	A0A177VRS8	KOW domain-containing protein.	Uncharacterized protein.	0.999
A4X06_g157	A4X06_g2651	A0A177VYI1	A0A177VQ09	KOW domain-containing protein.	Ribosomal_L23eN domain-containing protein.	0.999
A4X06_g157	A4X06_g3486	A0A177VYI1	A0A177VMM2	KOW domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS3 family.	0.999
A4X06_g157	A4X06_g3887	A0A177VYI1	A0A177VP72	KOW domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	0.999
A4X06_g157	A4X06_g7027	A0A177VYI1	A0A177U9T1	KOW domain-containing protein.	Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).	0.805
A4X06_g157	A4X06_g7215	A0A177VYI1	A0A177U751	KOW domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.	0.999
A4X06_g157	A4X06_g7499	A0A177VYI1	A0A177U4K8	KOW domain-containing protein.	Ribosomal_L18_c domain-containing protein.	0.999
A4X06_g157	A4X06_g8523	A0A177VYI1	A0A177TJF7	KOW domain-containing protein.	Uncharacterized protein.	0.999
A4X06_g157	A4X06_g9081	A0A177VYI1	A0A177T3Q3	KOW domain-containing protein.	Uncharacterized protein.	0.999