STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001417815_00880Unannotated protein. (261 aa)    
Predicted Functional Partners:
GCA_001417815_01035
Unannotated protein.
 
  
 0.621
GCA_001417815_00879
Unannotated protein.
       0.474
GCA_001417815_00881
Unannotated protein.
       0.404
GCA_001417815_00882
Unannotated protein.
       0.404
Your Current Organism:
Bifidobacterium aesculapii
NCBI taxonomy Id: 1329411
Other names: B. aesculapii, Bifidobacterium aesculapii Modesto et al. 2014, Bifidobacterium sp. MRM_3/1, Bifidobacterium sp. MRM_4/2, DSM 26737, JCM 18761, strain MRM 3/1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.