STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000763315_03355Unannotated protein. (188 aa)    
Predicted Functional Partners:
GCA_000763315_03131
Unannotated protein.
    
 0.941
GCA_000763315_02507
Unannotated protein.
    
 0.874
GCA_000763315_02120
Unannotated protein.
  
    0.721
GCA_000763315_00201
Unannotated protein.
 
  
 0.680
GCA_000763315_03354
Unannotated protein.
     
 0.632
GCA_000763315_01358
Unannotated protein.
  
 
 0.631
GCA_000763315_03271
Unannotated protein.
 
  
 0.614
GCA_000763315_03353
Unannotated protein.
  
  
 0.599
GCA_000763315_00701
Unannotated protein.
 
      0.577
GCA_000763315_02504
Unannotated protein.
 
  
  0.576
Your Current Organism:
Thermoactinomyces daqus
NCBI taxonomy Id: 1329516
Other names: CICC 10681, DSM 45914, T. daqus, Thermoactinomyces daqus Yao et al. 2014, bacterium H-18, strain H-18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.