STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A167JWM6Uncharacterized protein. (1268 aa)    
Predicted Functional Partners:
A0A167PPH7
PX-domain-containing protein.
     
 0.774
A0A167KA49
Snare-like protein; Belongs to the synaptobrevin family.
     
 0.685
A0A167H5G7
Vesicle transport v-snare protein vti1.
   
 
 0.679
A0A167QA92
PXA domain-containing protein.
  
 
 0.670
A0A167MMR2
t-SNARE; Belongs to the syntaxin family.
     
 0.627
A0A167N4F7
Uncharacterized protein.
   
 
  0.562
A0A167GK51
t-SNARE coiled-coil homology domain-containing protein.
    
 0.559
A0A167L6B4
Uncharacterized protein.
    
 0.559
A0A167RC75
Syntaxin.
    
 0.559
A0A167RPI6
CSN8_PSD8_EIF3K domain-containing protein.
     
 0.508
Your Current Organism:
Calocera viscosa
NCBI taxonomy Id: 1330018
Other names: C. viscosa TUFC12733, Calocera viscosa TUFC12733
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.