STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A167KJM7WD40 repeat-like protein. (612 aa)    
Predicted Functional Partners:
A0A167KHZ4
E3 ubiquitin-protein ligase RBX1-like protein.
    
 0.987
A0A167HR40
Uncharacterized protein; Belongs to the SKP1 family.
    
 0.974
A0A167NNR0
E3 ubiquitin ligase SCF complex, Skp subunit; Belongs to the SKP1 family.
    
 0.974
A0A167FRG0
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.950
A0A167HFY4
Cullin-domain-containing protein; Belongs to the cullin family.
    
 0.950
A0A167JH31
Cullin-domain-containing protein; Belongs to the cullin family.
    
 0.950
A0A167LM25
CMGC/GSK protein kinase; Belongs to the protein kinase superfamily.
    
 0.949
A0A167K183
Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.945
A0A167L6Z4
Serine/threonine-protein kinase.
    
 0.943
A0A167QVJ9
Ubiquitin.
    
 0.943
Your Current Organism:
Calocera viscosa
NCBI taxonomy Id: 1330018
Other names: C. viscosa TUFC12733, Calocera viscosa TUFC12733
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