A0A167PJ46 protein (Calocera viscosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A167PJ46

P-loop containing nucleoside triphosphate hydrolase protein. (186 aa)

Predicted Functional Partners:

A0A167SAM7

0.596

A0A167LPQ9

0.525

A0A167Q777

0.512

A0A167MP82

0.504

A0A167MAN6

0.500

A0A167NQR6

0.500

A0A167SAH6

0.480

A0A167RPZ4

0.479

A0A167QXT1

0.469

A0A167SD78

0.469

Your Current Organism:

Calocera viscosa

NCBI taxonomy Id: 1330018
Other names: C. viscosa TUFC12733, Calocera viscosa TUFC12733

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A167LPQ9	A0A167PJ46	ANTH-domain-containing protein.	P-loop containing nucleoside triphosphate hydrolase protein.	0.525
A0A167LPQ9	A0A167RPZ4	ANTH-domain-containing protein.	Clathrin adaptor, mu subunit; Belongs to the adaptor complexes medium subunit family.	0.779
A0A167LPQ9	A0A167SAH6	ANTH-domain-containing protein.	ANTH-domain-containing protein.	0.901
A0A167MAN6	A0A167PJ46	RING-type domain-containing protein.	P-loop containing nucleoside triphosphate hydrolase protein.	0.500
A0A167MP82	A0A167NQR6	Uncharacterized protein; Belongs to the peptidase M16 family.	Putative RPN11-26S proteasome regulatory subunit.	0.405
A0A167MP82	A0A167PJ46	Uncharacterized protein; Belongs to the peptidase M16 family.	P-loop containing nucleoside triphosphate hydrolase protein.	0.504
A0A167MP82	A0A167SAM7	Uncharacterized protein; Belongs to the peptidase M16 family.	Acetyl CoA carboxylase.	0.781
A0A167NQR6	A0A167MP82	Putative RPN11-26S proteasome regulatory subunit.	Uncharacterized protein; Belongs to the peptidase M16 family.	0.405
A0A167NQR6	A0A167PJ46	Putative RPN11-26S proteasome regulatory subunit.	P-loop containing nucleoside triphosphate hydrolase protein.	0.500
A0A167NQR6	A0A167Q777	Putative RPN11-26S proteasome regulatory subunit.	Ubiquitin carboxyl-terminal hydrolase.	0.505
A0A167PJ46	A0A167LPQ9	P-loop containing nucleoside triphosphate hydrolase protein.	ANTH-domain-containing protein.	0.525
A0A167PJ46	A0A167MAN6	P-loop containing nucleoside triphosphate hydrolase protein.	RING-type domain-containing protein.	0.500
A0A167PJ46	A0A167MP82	P-loop containing nucleoside triphosphate hydrolase protein.	Uncharacterized protein; Belongs to the peptidase M16 family.	0.504
A0A167PJ46	A0A167NQR6	P-loop containing nucleoside triphosphate hydrolase protein.	Putative RPN11-26S proteasome regulatory subunit.	0.500
A0A167PJ46	A0A167Q777	P-loop containing nucleoside triphosphate hydrolase protein.	Ubiquitin carboxyl-terminal hydrolase.	0.512
A0A167PJ46	A0A167QXT1	P-loop containing nucleoside triphosphate hydrolase protein.	P-loop containing nucleoside triphosphate hydrolase protein.	0.469
A0A167PJ46	A0A167RPZ4	P-loop containing nucleoside triphosphate hydrolase protein.	Clathrin adaptor, mu subunit; Belongs to the adaptor complexes medium subunit family.	0.479
A0A167PJ46	A0A167SAH6	P-loop containing nucleoside triphosphate hydrolase protein.	ANTH-domain-containing protein.	0.480
A0A167PJ46	A0A167SAM7	P-loop containing nucleoside triphosphate hydrolase protein.	Acetyl CoA carboxylase.	0.596
A0A167PJ46	A0A167SD78	P-loop containing nucleoside triphosphate hydrolase protein.	Uncharacterized protein.	0.469